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authorLoic Guegan <manzerberdes@gmx.com>2019-05-22 11:24:17 +0200
committerLoic Guegan <manzerberdes@gmx.com>2019-05-22 11:24:17 +0200
commit8bdcd37ac44fe96d2c59424a24752f87f0444e36 (patch)
treee31a0fe38c01bc6814a0b35474875fe538ea87c2 /logs/g5k/analysis.org
parent5a77b67d6baae0414310d29cab6f240963866062 (diff)
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+
+
+
+
+* Logs Analysis
+** R Scripts
+*** Plots script
+ #+BEGIN_SRC R :results output :noweb yes :file second-final/plot.png
+ <<RUtils>>
+ dataOrig=loadData("./second-final/data.csv")
+
+ data=dataOrig%>%filter(simKey=="nbSensors")%>%filter(state=="sim",nbSensors==100)
+ dataIDLE=dataOrig%>%filter(simKey=="nbSensors")%>%filter(state!="sim",nbSensors==100)
+ data=data%>%mutate(meanEnergy=mean(energy))
+ dataIDLE=dataIDLE%>%mutate(meanEnergy=mean(energy))
+ data=rbind(data,dataIDLE)
+ ggplot(data,aes(x=time,y=energy))+geom_point(position="jitter")+xlab(getLabel("time"))+expand_limits(y=0)+facet_wrap(~state)+geom_hline(aes(color=state,yintercept=mean(meanEnergy)))
+ ggsave("./second-final/plot.png",dpi=180)
+ #+END_SRC
+
+ #+RESULTS:
+ #+begin_example
+ # A tibble: 3,050 x 8
+ ts energy simKey vmSize nbSensors time state meanEnergy
+ <dbl> <dbl> <chr> <dbl> <dbl> <dbl> <chr> <dbl>
+ 1 1558429001. 90.2 nbSensors 2048 100 0 IDLE 90.8
+ 2 1558429001. 89 nbSensors 2048 100 0.0199 IDLE 90.8
+ 3 1558429001. 89 nbSensors 2048 100 0.0399 IDLE 90.8
+ 4 1558429001. 90.8 nbSensors 2048 100 0.0599 IDLE 90.8
+ 5 1558429001. 91 nbSensors 2048 100 0.0799 IDLE 90.8
+ 6 1558429001. 90.5 nbSensors 2048 100 0.1000 IDLE 90.8
+ 7 1558429001. 89.9 nbSensors 2048 100 0.120 IDLE 90.8
+ 8 1558429001. 88.6 nbSensors 2048 100 0.140 IDLE 90.8
+ 9 1558429001. 88.6 nbSensors 2048 100 0.160 IDLE 90.8
+ 10 1558429001. 90.5 nbSensors 2048 100 0.180 IDLE 90.8
+ # … with 3,040 more rows
+ #+end_example
+
+
+
+
+
+
+**** Final plot
+
+ #+BEGIN_SRC R :results graphics :noweb yes :file second-final/plot-final.png :session *R*
+ <<RUtils>>
+ data=loadData("./second-final/data.csv")
+ data=data%>%filter(state=="sim",simKey=="nbSensors")
+
+
+ # Cloud
+ data10=data%>%filter(nbSensors==20)%>%mutate(meanEnergy=mean(energy)) %>% slice(1L)
+ data100=data%>%filter(nbSensors==100)%>%mutate(meanEnergy=mean(energy)) %>% slice(1L)
+ data300=data%>%filter(nbSensors==300)%>%mutate(meanEnergy=mean(energy)) %>% slice(1L)
+ dataCloud=rbind(data10,data100,data300)%>%mutate(nbSensors=as.character(nbSensors))
+
+ # Network
+ dataNet=loadData("../../ns3-simulations/logs/data.csv")
+ dataNet=dataNet%>%filter(simKey=="NBSENSORS")
+ data5=dataNet%>%filter(sensorsNumber==5)%>%select(networkEnergy,sensorsNumber)
+ data10=dataNet%>%filter(sensorsNumber==10)%>%select(networkEnergy,sensorsNumber)
+
+ print(data20)
+
+ ggplot(dataCloud)+geom_bar(aes(x=nbSensors,y=meanEnergy),stat="identity")+xlab("Sensors Number")+ylab("Power Consumption (W)")
+ ggsave("./second-final/plot-final.png",dpi=80)
+
+ #+END_SRC
+
+ #+RESULTS:
+
+
+
+
+ #+BEGIN_SRC R :noweb yes :results graphics :file final.png :session *R*
+ <<RUtils>>
+
+
+ data=loadData("./second-final/data.csv")
+ data=data%>%filter(state=="sim",simKey=="nbSensors")
+
+ # Cloud
+ data10=data%>%filter(nbSensors==20)%>%mutate(energy=mean(energy)) %>% slice(1L)
+ data100=data%>%filter(nbSensors==100)%>%mutate(energy=mean(energy)) %>% slice(1L)
+ data300=data%>%filter(nbSensors==300)%>%mutate(energy=mean(energy)) %>% slice(1L)
+ dataCloud=rbind(data10,data100,data300)%>%mutate(sensorsNumber=nbSensors)%>%mutate(type="Cloud")%>%select(sensorsNumber,energy,type)
+
+
+
+ approx=function(data1, data2,nbSensors){
+ x1=data1$sensorsNumber
+ y1=data1$energy
+
+ x2=data2$sensorsNumber
+ y2=data2$energy
+
+ a=((y2-y1)/(x2-x1))
+ b=y1-a*x1
+
+ return(a*nbSensors+b)
+
+ }
+
+
+ simTime=1800
+
+ # Network
+ data=read_csv("../../ns3-simulations/logs/data.csv")
+ data=data%>%filter(simKey=="NBSENSORS")
+ dataC5=data%>%filter(sensorsNumber==5)%>% mutate(energy=networkEnergy/simTime) %>%select(energy,sensorsNumber)
+ dataC10=data%>%filter(sensorsNumber==10)%>%mutate(energy=networkEnergy/simTime) %>%select(energy,sensorsNumber)
+ dataNet=rbind(dataC5,dataC10)%>%mutate(type="Network")
+
+ # Sensors
+ dataS5=data%>%filter(sensorsNumber==5)%>% mutate(energy=sensorsEnergy/simTime) %>%select(energy,sensorsNumber)
+ dataS10=data%>%filter(sensorsNumber==10)%>%mutate(energy=sensorsEnergy/simTime) %>%select(energy,sensorsNumber)
+ dataS=rbind(dataS5,dataS10)%>%mutate(type="Sensors")
+
+ fakeNetS=tibble(
+ sensorsNumber=c(20,100,300,20,100,300),
+ energy=c(dataC10$energy,approx(dataC5,dataC10,100),approx(dataC5,dataC10,300),dataS10$energy,approx(dataS5,dataS10,100),approx(dataS5,dataS10,300)),
+ type=c("Network","Network","Network","Sensors","Sensors","Sensors")
+ )
+
+ fakeNetS=fakeNetS%>%mutate(sensorsNumber=as.character(sensorsNumber))
+ dataCloud=dataCloud%>%mutate(sensorsNumber=as.character(sensorsNumber))
+
+ data=rbind(fakeNetS,dataCloud)%>%mutate(sensorsNumber=as.character(sensorsNumber))
+
+
+ data=data%>%mutate(sensorsNumber=fct_reorder(sensorsNumber,as.numeric(sensorsNumber)))
+
+ ggplot(data)+geom_bar(position="dodge2",colour="black",aes(x=sensorsNumber,y=energy,fill=type),stat="identity")+
+ xlab("Sensors Number")+ylab("Power Consumption (W)")+guides(fill=guide_legend(title="Part"))
+ ggsave("final.png",dpi=80)
+
+ #+END_SRC
+
+ #+RESULTS:
+ [[file:final.png]]
+
+
+
+
+
+*** R Utils
+ RUtils is intended to load logs (data.csv) and providing
+ simple plot function for them.
+
+ #+NAME: RUtils
+ #+BEGIN_SRC R :eval never
+ library("tidyverse")
+
+ # Fell free to update the following
+ labels=c(time="Time (s)")
+
+ loadData=function(path){
+ data=read_csv(path)
+ }
+
+ # Get label according to varName
+ getLabel=function(varName){
+ if(is.na(labels[varName])){
+ return(varName)
+ }
+ return(labels[varName])
+ }
+ #+END_SRC
+
+** Plots -> PDF
+ Merge all plots in plots/ folder into a pdf file.
+ #+NAME: plotToPDF
+ #+BEGIN_SRC bash :results output :noweb yes
+ orgFile="plots/plots.org"
+ <<singleRun>> # To get all default arguments
+
+ # Write helper function
+ function write {
+ echo "$1" >> $orgFile
+ }
+
+ echo "#+TITLE: Analysis" > $orgFile
+ write "#+LATEX_HEADER: \usepackage{fullpage}"
+ write "#+OPTIONS: toc:nil"
+ # Default arguments
+ write '\begin{center}'
+ write '\begin{tabular}{lr}'
+ write 'Parameters & Values\\'
+ write '\hline'
+ write "sensorsPktSize & ${sensorsPktSize} bytes\\\\"
+ write "sensorsSendInterval & ${sensorsSendInterval}s\\\\"
+ write "sensorsNumber & ${sensorsNumber}\\\\"
+ write "nbHop & ${nbHop}\\\\"
+ write "linksBandwidth & ${linksBandwidth}Mbps\\\\"
+ write "linksLatency & ${linksLatency}ms\\\\"
+ write '\end{tabular}'
+ write '\newline'
+ write '\end{center}'
+
+ for plot in $(find plots/ -type f -name "*.png")
+ do
+ write "\includegraphics[width=0.5\linewidth]{$(basename ${plot})}"
+ done
+
+ # Export to pdf
+ emacs $orgFile --batch -f org-latex-export-to-pdf --kill
+ #+END_SRC
+
+
+** CSVs -> CSV
+ Merge all energy file into one (and add additional fields).
+
+ #+NAME: mergeCSV
+ #+BEGIN_SRC sh
+ #!/bin/bash
+
+ whichLog="second-final"
+
+
+ logFile="$(dirname $(readlink -f $0))"/$whichLog/simLogs.txt
+ dataFile=$(dirname "$logFile")/data.csv
+
+
+ getValue () {
+ line=$(echo "$1" | grep "Simulation para"|sed "s/Simulation parameters: //g")
+ key=$2
+ echo "$line"|awk 'BEGIN{RS=" ";FS=":"}"'$key'"==$1{gsub("\n","",$0);print $2}'
+ }
+
+ ##### Add extract info to energy #####
+ IFS=$'\n'
+ for cmd in $(cat $logFile|grep "Simulation parameters")
+ do
+ nodeName=$(getValue $cmd serverNodeName)
+ from=$(getValue $cmd simStart)
+ to=$(getValue $cmd simEnd)
+ vmSize=$(getValue $cmd vmSize)
+ nbSensors=$(getValue $cmd nbSensors)
+ simKey=$(getValue $cmd simKey)
+ csvFile="$whichLog/${simKey}_${vmSize}VMSIZE_${nbSensors}NBSENSORS_${from}${to}.csv"
+ csvFileIDLE="$whichLog/${simKey}_${vmSize}VMSIZE_${nbSensors}NBSENSORS_${from}${to}_IDLE.csv"
+ tmpFile=${csvFile}_tmp
+ echo ts,energy,simKey,vmSize,nbSensors,time,state > $tmpFile
+ minTs=$(tail -n+2 $csvFile|awk -F"," 'BEGIN{min=0}$1<min||min==0{min=$1}END{print(min)}') # To compute ts field
+ minTsIDLE=$(tail -n+2 $csvFileIDLE|awk -F"," 'BEGIN{min=0}$1<min||min==0{min=$1}END{print(min)}') # To compute ts field
+ tail -n+2 ${csvFile} | awk -F"," '{print $0",'$simKey','$vmSize','$nbSensors',"$1-'$minTs'",sim"}' >> $tmpFile
+ tail -n+2 ${csvFileIDLE} | awk -F"," '{print $0",'$simKey','$vmSize','$nbSensors',"$1-'$minTsIDLE'",IDLE"}' >> $tmpFile
+ done
+
+
+ ##### Fill dataFile #####
+ echo ts,energy,simKey,vmSize,nbSensors,time,state > $dataFile
+ for tmpFile in $(find ${whichLog}/*_tmp -type f)
+ do
+ tail -n+2 $tmpFile >> $dataFile
+ rm $tmpFile # Pay attention to this line :D
+ done
+ #+END_SRC
+
+ #+RESULTS: mergeCSV
+
+
+
+** Custom Plots
+
+ #+NAME: ssiNet
+ #+BEGIN_SRC R :noweb yes :results graphics :file plots/sensorsSendInterval-net.png
+ <<RUtils>>
+
+ data%>%filter(simKey=="SENDINTERVAL",sensorsNumber==20) %>% ggplot(aes(x=sensorsSendInterval,y=networkEnergy))+xlab(getLabel("sensorsSendInterval"))+ylab(getLabel("networkEnergy"))+
+ geom_line()+labs(title="For 20 sensors")
+ ggsave("plots/sensorsSendInterval-net.png",dpi=80)
+ #+END_SRC
+
+ #+RESULTS:
+ [[file:plots/sensorsSendInterval-net.png]]
+
+
+ #+NAME: ssiWifi
+ #+BEGIN_SRC R :noweb yes :results graphics :file plots/sensorsSendInterval-wifi.png
+ <<RUtils>>
+ data%>%filter(simKey=="SENDINTERVAL",sensorsNumber==20) %>% ggplot(aes(x=sensorsSendInterval,y=sensorsEnergy))+xlab(getLabel("sensorsSendInterval"))+ylab(getLabel("sensorsEnergy"))+
+ geom_line() + geom_line()+labs(title="For 20 sensors")
+ ggsave("plots/sensorsSendInterval-wifi.png",dpi=80)
+ #+END_SRC
+
+ #+RESULTS: ssiWifi
+ [[file:plots/sensorsSendInterval-wifi.png]]
+
+ #+RESULTS:
+ [[file:plots/sensorsSendInterval.png]]